Nondisjunction

Previously, we talked about meiosis (production of sperms and eggs) and we said that the separation of the homologous chromosomes in meiosis 1 happens in the anaphase, so the spindle fibers attach to each homologous chromosome and they disjoin them from each other and each homologous chromosome goes to the opposite pole of the cell. However, in meiosis 2 the separation will be in the sister chromatids in anaphase 2. Nondisjunction: It’s something wrong that happens by mistake Sometimes nondisjunction happens, which is the failure of homologous chromosomes to disjoin during the anaphase 1, or failure of the sister chromatids of the same chromosome to disjoin during anaphase 2. Normally, we have 2 homologous chromosomes. In anaphase 1 each homologous chromosome should go to the opposite pole of the cell in order to divide the cell into 2 daughter cells. So sometimes the homologous chromosomes or the sister chromatids, instead of going to the opposite poles of the cell will mistakenly go to the same pole. We have two types of nondisjunction: 1- In meiosis 1 (anaphase 1): failure to disjoin homologous chromosomes in anaphase 1, we will end up having one cell with 1 missing chromosome (n-1) and the other with 1 extra chromosome (n+1), so eventually when meiosis 2 occurs, half of the daughter cells will have 1 extra chromosome (n+1) and the other half of the daughter cell will have 1 missing chromosome (n-1). 2- In meiosis 2 (anaphase 2): the disjoining of homologous chromosomes happens normally in anaphase 1, but in anaphase 2, one cell will fail to disjoin sister chromatids so we will end up with half of the daughter cells carrying the normal complement of the chromosomes (n), 1/4 of them will have one missing chromosome (n-1) and the other 1/4 of them will have an extra chromosome (n+1). 2|Page Can nondisjunction happen in mitosis? Yes it can, because it is already happening in meiosis 2 which is the same as mitosis, so failing to disjoin sister chromatids can happen in both meiosis and mitosis. Aneuploidy Aneuploidy(not the exact multiple of haploid cells )so it is : is the presence of an abnormal number of chromosomes in a cell. It is when the number of chromosomes is not an exact multiple (Haploid cells) of the normal chromosome number (46), for example like having a sperm with 24 chromosomes (n+1). So the number of the chromosomes in the fertilized egg is 47 instead of 46 chromosomes. FROM THE SLIDE: "Aneuploidy results from the fertilization of gametes in which nondisjunction occurred. Offspring with this condition have an abnormal number of a particular chromosome" How does that happen? It happens during the nondisjunction in the anaphase either meiosis 1 or meiosis. For example Down syndrome the child has 47 chromosomes (2 homologous of number 21 chromosome) The Aneuploidy can be: • Trisomic (2n+1): extra chromosome (trisomy) for example, if a nondisjunction happened to chromosome 21, we will have a sperm that has an extra 21 chromosome. When this sperm fertilizes an egg, this fertilized egg will have three chromosomes of chromosome 21. This is called trisomy 21 which is in fact Down syndrome. "FROM the SLIDE: A trisomic zygote has three copies of a particular chromosome. Additional (3 rather than 2) chromosome" • Monosomic (2n-1): missing chromosome (monosomy) For example, sometimes it is possible that an egg gets fertilized by a sperm that doesn’t have chromosome 21, so instead of having a fertilized egg with two homologous chromosomes of chromosome 21, it will have just one. This is called monosomy 21. This is in fact found in turner syndrome. "FROM THE SLIDE: A monosomic zygote has only one copy of a particular chromosome. One chromosome of a pair missing" 3|Page Polyploidy and Euploidy EUPLOIDY is the exact multiples of (n), for example look at the picture, this is triploidy because if you divide 69 by 23 the result will be 3, so we have (3n) chromosomes which we consider to be euploidy and not Aneuploidy, because (3n) actually is a multiple of (n). FROM THE SLIDE: Euploid - any chromosome number that is an exact multiple of the number of chromosomes in a normal haploid gamete (n). Most somatic cells are diploid (2N). haploid (1 set), diploid (2 sets), triploid (3 sets), tetraploid (4 sets) *The doctor mentioned that he is not necessarily going to use pictures of the Euploidy in the exam, he is going to mention it in writing, which is simply “the number of the chromosomes (“the sex chromosomes”)”, in the example above it is 69,XXY. (NOTE: Don't mix up between triploidy (extra set of chromosomes 3n) and trisomy (extra chromosomes 2n+1)) POLYPLOIDY is a condition in which an organism has more than two complete sets of chromosomes - Triploidy (3n) is three sets of chromosomes. Tetraploidy (4n) is four sets of chromosomes Polyploidy is common in plants, but not animals. Polyploidy are more normal in appearance than aneuploids. Alteration of Chromosome structure As we said before the chromosomal abnormality can be numerical (aneuploidy and euploidy), but sometimes we have the normal complement of chromosomes (46 chromosomes) so there are no extra or missing chromosomes, but those 46 chromosomes have abnormalities or chromosomal aberrations, those structural abnormalities can be: 1. Partial Deletion: for example, we have 46 chromosomes but one of them has a deleted part, this is chromosomal deletion. 4|Page 2. Partial Duplication: a region in a chromosome is duplicated. 3. Inversion: making a cut in the chromosomes and flip it; reversing orientation of a segment within a chromosome. NOTE: this type of structural changes does not gain or loss any DNA, it is just rearrangement of genetic material. However, in duplication and deletion there is either loss or gain genetic material. 4. Translocation; exchanging genetic material between nonhomologous chromosomes, like moves a segment from one chromosome to another. NOTE: Translocation is abnormal because it is exchanging genetic material between nonhomologous chromosomes, whereas the recombination is normal (happens in prophase 1), which is exchanging genetic material between homologous chromosomes. Human Disorders Due to Chromosomal Alterations 5|Page Down syndrome (Trisomy 21): Extra chromosome aneuploidy, it affects about one out of every 700-800 children born. With the advanced maternal age in (later 30s and 40s) the risk of Down syndrome increases, so any woman in her late thirties is strongly recommended to test (karyotpe) the fetus during pregnancy for trisomy 21. (there is a causation and correlation between mother age and Down syndrome). This is the karyotyping of trisomy 21, we can see clearly that chromosome 21 has an extra chromosome. If we want this karyograph in writing it would be like this, 47,XX,+21. Males are affected more than the females by down syndrome, the Male:Female ratio is almost 3:2. The clinical features of Down syndrome (An exam question and the numbers are not for memorization): - Mental retardation (Low IQ 25-50). Hypotonia (80%), their muscles relaxed. Up slanting palpebral fissures (80%). Small, low-set ears (60%). Congenital heart disease (30%-50%). Epicanthic folds. Protruding tongue. Intestinal problems. Gap between first and second toes. 15-fold increase in risk for leukemia. Simian line (transverse crease) (45%). Common facial feature This graph shows the probability of giving birth to a baby with down syndrome by woman’s age, 1 case in 1528 with the 20 year old mothers, but in 45 year old mothers there is 1 case in 28 which is very high. 6|Page Why does Down syndrome happen? It happens because of the nondisjunction in meiosis 1 or meiosis 2. - - - 94% of cases due to maternal errors (during egg formation): • 64% due to meiosis 1. • 19% due to meiosis 2. 4.5% of cases due to paternal errors (during spermatogenesis): • 1% due to meiosis 1. • 3.5% due to meiosis 2. 1.5% unknown reasons. Before we proceed to Down syndrome, the dr. Talked about 2 concepts that we should understand, which they are mutation and polymorphism: 1- Mutation is a change in a DNA sequence. Such as changing T with A base 2- Polymorphism is also defined as a change in DNA sequence. Such as changing T into A base, regarding to these changes will effect on protein formation such as missence, slinece, or etc... So the difference between mutation and polymorphism is the prevalence, which means if the (T) that is changed into (A) base in specific population less than 1% we considered it as mutation regardless of the clinical consequence or outcome. However, if this changes of T into A base more than 1% in that population we call it as polymorphism. NOTE: polymorphism is not necessarily to be non-diseased causing. For example; if the change of the base in the African population is less than 1% is called mutation. However, if the same change in the same location in the gene is more than 1% in American population it will call polymorphisms. Coming back to Down syndrome, how I could know the non-disjunction if it's caused of maternal or paternal (the extra chromosome from where does it come)? By looking on the polymorphisms on the DNA sequences (homologus chromosomes). The Chromosomes are consisting of DNA and proteins. DNA has many regions. Some of them have genes and the others are not having any genes (non coding regions). These two regions are about 2% of the whole DNA (coding +noncoding). 7|Page Also, there is another region of DNA in chromosomes, which has tetra or hexa nucleotides that are repeated several times on that specific region on the chromosome. These numbers of repeats are different from person to person. So I can differentiate between people by these repeats. They are considered as a maker for each person. In the diagram represents mother’s chromosomes with the fathers and their child’s who has Down syndrome. The circle refers to the mother and the square refers to the father and the other circle beneath them refers to a baby girl, beside each symbol their chromosomes. We are going to take a specific region from chromosome 21 to know the extra chromosome 21 is paternal or maternal. Let’s say, we will look at region A in chromosome 21 in both parents. So in the father, the repeat in that region A is (A= 3, 4. which means that the hexa or tetra nucleotides is repeated 3 times in the first paternal chromosome and 4 times in the second paternal chromosome) and the mother (A= 1, 2. Here the nucleotides are repeated once at the first maternal chromosome and twice at the second maternal chromosome). If we look to the same region in the child who has 3 chromosomes (A=1, 2, 3) we will notice that 2 repeats were from the mother and 1 repeat was from the father. This is because the father has 4 repeats of A, which is not present in the child. Notice that probe B is not informative here, because both the mother and the father have one repeat of it. NOTE: The Dr. said I might give you another example with different representation by polymorphic Markers; we should be familiar with it. Another way: A proband is defined as an individual that brings the family to clinical attention. In other words, the person who auto-connect with the clinician. Sometimes it is not necessary to be the patient. (It’s important to know that). 8|Page We are looking at the signals, there is a tetra repeat (4 nucleotides repeated several times). The region we are investigating in chromosome 21 is called (D21S1432). Note: we can look into more than one region . The proband has 3 signals (143, 144 & 145), the father has 2 signals (141& 145) and the mother has 2 signals (143, 144). So if we compare the results we will find that 2 signals are same as the mother and 1 signal is the same as the father. So we know that the extra chromosome is maternal. Here is another way with gel electrophoresis, refer to the picture: "Revision: as we know from the previous lectures that DNA is negatively charged, so when we expose DNA with electrical current immediately it will migrate to positive charge (anode). Also, the bigger size DNA fragments will move slower than smaller one. That is what basically the electrophoresis does to DNA". P = Proband, F= Father, M= Mother, S= siblings. There are 3 arrows in the left; each of them refers to a double band (In other words: the proband has 3 chromosomes). So the 1st & 2nd arrows from the top are showing bands that are from the mother and the last arrow is from the father. So again, the extra chromosome is maternal. As the sibling’s have only two bands, they’re normal. 9|Page Partial trisomy (21q) There is a rare case of dawn syndrome called Partial Down syndrome (21q). It is very confusing when we diagnosis it by karyotyping because the patient has 46 chromosomes instead of 47 chromosomes despite that the clinical picture of him is clearly down syndrome. How patients get this type of disease (partial Down syndrome)? Do you remember in the previous lecture when we said that chromosome 21 is one of the 5 acrocentric chromosomes (13, 14, 15, 21, 22). Those chromosomes, as we said before, have P arms without clinical consequences if not present. Look at the picture above, the 1st chromosome 21 on the left is normal, as it has a p & q arms separated by centromere. However, the other one has an q arm on the top instead of p arm and after the centromere there is another q arm (2 q arms on one chromosome). That change causes the partial trisomy Down syndrome. Also, it is differentiated from the normal trisomy as there are 46 chromosomes but with 3 q arms in chromosome21. Note that in both the normal trisomy and partial trisomy, there’re both 3 q arms. Be familiar with the karyotype. Trisomy 18 (Edward Syndrome), kayrotyping (47, XY, +18): It is the 2nd most common viable trisomy after Down syndrome, has extra chromosome in 18 chromosomes. Clinical features: - - - 95% of cases have congenital heart disease (CHD). Failure to thrive (FTT): means their development is slower than their actual ages (very small sizes compared to their ages). Growth retardation and mental retardation Hypertonic. They have unusual hand position (clenched fist). Prominent occiput (their occipital bone very big). dr. added their own clinical notice that they usually have lower set ears (near mandible bone). The sternum is smaller and shorter. They have problems with intestine. They have rocker bottom feet. 10 | P a g e Trisomy 13, Patau syndrome, kayrotyping (47, XX, +13): It's 3rd (the last) viable trisomy (autosomal trisomy). Clinical features: - - - 85% has CHD. Mental retardation Microcephali (the size of the head very small comparable to their age, their size is deviated out of the normal head size range). Scalp defect. Small eyes. Low set and malformed ears. Cleft lip and/or palate (they are facial and oral malformations, also physical split or separation of the two sides of the upper lip and appears as a narrow opening or gap in the skin of the upper lip. This separation often extends beyond the base of the nose and includes the bones of the upper jaw and/or upper gum.) –We took that with Dr. Heba in details! Polydactyly and syndactyly (polydactyle is an extra digit in the hands or feet, while syndactyle means fused digits together). Polycystic kidney disease. -Rocker bottom feet. These are cases of viable numerical abnormalities (autosomal) that have been mentioned by the Dr. that have trisomy chromosomal abnormalities and there is no viable monosomy case. (Missing genetic material is more deleterious than extra genetic material so we don't have viable monosomy cases 11 | P a g e